CDS

Accession Number TCMCG057C17395
gbkey CDS
Protein Id XP_018482550.1
Location join(13852363..13852576,13852759..13853030,13853084..13853441,13853499..13854985)
Gene LOC108853640
GeneID 108853640
Organism Raphanus sativus

Protein

Length 776aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018627048.1
Definition PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC108853640 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description ribosomal small subunit assembly
KEGG_TC -
KEGG_Module M00177        [VIEW IN KEGG]
M00179        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE br01610        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03011        [VIEW IN KEGG]
KEGG_ko ko:K02978        [VIEW IN KEGG]
ko:K08053        [VIEW IN KEGG]
ko:K18061        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03010        [VIEW IN KEGG]
ko04010        [VIEW IN KEGG]
ko04014        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map03010        [VIEW IN KEGG]
map04010        [VIEW IN KEGG]
map04014        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0000028        [VIEW IN EMBL-EBI]
GO:0000075        [VIEW IN EMBL-EBI]
GO:0000077        [VIEW IN EMBL-EBI]
GO:0000184        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0002181        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003735        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006612        [VIEW IN EMBL-EBI]
GO:0006613        [VIEW IN EMBL-EBI]
GO:0006614        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006915        [VIEW IN EMBL-EBI]
GO:0006919        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006978        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008047        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008219        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0008494        [VIEW IN EMBL-EBI]
GO:0008630        [VIEW IN EMBL-EBI]
GO:0008656        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0010942        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0010950        [VIEW IN EMBL-EBI]
GO:0010952        [VIEW IN EMBL-EBI]
GO:0012501        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015935        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016504        [VIEW IN EMBL-EBI]
GO:0016505        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0022626        [VIEW IN EMBL-EBI]
GO:0022627        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030162        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0030330        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031570        [VIEW IN EMBL-EBI]
GO:0031571        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034250        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042255        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0042770        [VIEW IN EMBL-EBI]
GO:0042771        [VIEW IN EMBL-EBI]
GO:0042772        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043028        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043065        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043068        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043280        [VIEW IN EMBL-EBI]
GO:0043281        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044391        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044445        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044773        [VIEW IN EMBL-EBI]
GO:0044774        [VIEW IN EMBL-EBI]
GO:0044783        [VIEW IN EMBL-EBI]
GO:0044819        [VIEW IN EMBL-EBI]
GO:0045047        [VIEW IN EMBL-EBI]
GO:0045182        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045727        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045862        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0052547        [VIEW IN EMBL-EBI]
GO:0052548        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061134        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0070972        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072331        [VIEW IN EMBL-EBI]
GO:0072332        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072599        [VIEW IN EMBL-EBI]
GO:0072657        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090079        [VIEW IN EMBL-EBI]
GO:0090150        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097190        [VIEW IN EMBL-EBI]
GO:0097193        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901988        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1901991        [VIEW IN EMBL-EBI]
GO:1902806        [VIEW IN EMBL-EBI]
GO:1902807        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000045        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000116        [VIEW IN EMBL-EBI]
GO:2000134        [VIEW IN EMBL-EBI]
GO:2001056        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGCGACCAACCACGACGCCGTTATCAATTACACTACAAACTGGACTCTCGCGGGCGGTTCCCTCACAGACTCCGTCTCCTTCGAGTCATCCTTCTCGACTACCACCGCAAACCACGAATCCGACGACGGAAACGGAATCATCCCCGTGGCCAAGTCACCGCTGCTTCTGCTCCCTCCGGTTCCTAACGGAGATCCTTGTGAAATCACCATTACGTTTGCACAAGAATATGAAGTAAGGCAAGTCTATATCCGAAGTAGTGCACGTGTATACGAAGTTTATTACAACAAAAAGAAGCGAGATGATAGAGAATACCTCTGTACAGTTCGATGTGGCGTTGCAGTGAGAGAAGAAGAAGAAGAAGATGAAGAAGCTTCTAAGAATGGAGTGGAACCGGGTGAGGATGATGATCCGATGGCGAAGAAGGTCAAAGCTAATGGGAAAGGACAGACCAAGGAAGATGACTGGGTTGAAGTGAAATCATATCTCTCTATACTACTTTTTATGTAAATAATTGGTGTTAATGGGGGAAATGATTTTCAGGATCTTTATGAAGCAACTGCAGAGATCGATGATGCAGAGCCTTGTGTTTCCATTACACTCCGTCTTCTCTCGCTTCAGGATAAAAGATGTGCGCTTGTTGATGAAGTTTATGTTTTTGCTGATCCTGTTGATCCGAGTGAGTCAGAGAAGGAAGAAACAGGTGAAACAGGAAACTCATCCAGTAGTGCGTTTATGGCTATGTTTATGCCCGCTCTCTTACAGATGTCCCGAGGAAAAGATGTCAGAAAAGAGCATGACAGACAAGTTTTCGGACAGTCCAACAGCAGGAATCCAGCTAATTTCGCTAGCGCTGATCAGAAAGGAGTGGACTTACCAGTTTTAGCCAATACGCTTGCAAAGCATGCTGATGCAACACGAGTACCTGAAGCAGAAATCAAACGTGATGTATCTTGCAGTAATGTGGAAACTATACTCCATCAGCTTGTGAACAAGGTAAGCAGGTTAGAAACTATCTTGACAAGTTTTGAAGATCGGATGTTGAAACCTATCTGTAGTATTGACGCAAGGCTCCAGCTAGTAGAGGAGAAACTTGAAGAGCTAGGCAAGAAGTCATTTGAATCTGAATTGCTTGATCAAACAAAAGTACCCAATCTGGGCTCTCAGGGCAGTGATACAGATAAAACTTCTGAAACCGATCAGTTGGATGGATTGAACAAAAACACAGATAATCCACAATTGGCTTCTTGTGCTACAACAGTTGTTCCTGACTCCGCTAGTATAGACAAGGGTGAAGATTATGCTGTTGTACAGCCGAAGAACAAACCGGATGATATTCTTACAAAGTTCGTAGAACCGAGGAATGAAAATAACTCAATCTCAGGAGAGGTGATTTCTGCTGAATCTGAGATCAGTAAAGAGGAGGTTAGTCATTCTCTTGGGGAAGGATCTTTGGAAGAGAATCCAAAACGTTCAGTGTCTATAAATGATGCTTTGGCATCTGCACTTACTGGATTGTTGTCTTCAACTTCAATCACGGACGGAAAATTCAGCCAAGCCCTCGTAGTAAGAGCCCCTGATTTTTCAGATGAAGATGACATGGAGACGGAAGAGGAACCTCAGACTGATTCCCATCCAGACAAAAGCCAAGTTGCAGCAGAGGAGTTGGGAAACACATCCTCTGCCTCGGAGAGCCCAACTTCTCCACGGAAAGAGCCTGGGATTACTCTTTGTAATGAAGAAGGTTCTCAGGAAATGATTAATGATGTTCCTGAAACACTGGGTGATACTGTGGGAGGTTATGCAGATGGTGAGACTGTGGTTGGCGTCAGTGACTATGGGTTAGATGGAGATGCAGTGACATCAAGCGCAAAAGCTGATCATTATTCAGAGAGCGAGAAATATAGTTATGAGCGCAGGAATCCCGATTCCTTGGATCACGAGCTCGCGAGTTCAAATGTAACTACTAAAGAATCTGAAGAAGAACCTGAAACGGGTGATGTTTTGAAGAGTGTTCTCGGTTTTCAACCTAATACCTCTTCGGTCGACTTCCTAGCTCCTGTTCTGGATGTGAAGTTTAATTCAGAGAGAAAAGTCTCAGACAGCATGTGTCTCTTTGAGTCACTCTTCACGGAAGGATCTAAGACTGTTGTAGTAGACTGCGACAACGGAGGTTTTGGTGATGATAACTTGGTTTCAGTGGAAGATGGAGAAGAACTAAAAGGCCCACCAACAGATACCCTTTCGTCTCTGGAGATGGATTACTATGAGACGAACGAGATGTATCTACAGTTGAATGCTGAGATATCAACAGCAAGTCTGATATGA
Protein:  
MDATNHDAVINYTTNWTLAGGSLTDSVSFESSFSTTTANHESDDGNGIIPVAKSPLLLLPPVPNGDPCEITITFAQEYEVRQVYIRSSARVYEVYYNKKKRDDREYLCTVRCGVAVREEEEEDEEASKNGVEPGEDDDPMAKKVKANGKGQTKEDDWVEVKSYLSILLFMXIIGVNGGNDFQDLYEATAEIDDAEPCVSITLRLLSLQDKRCALVDEVYVFADPVDPSESEKEETGETGNSSSSAFMAMFMPALLQMSRGKDVRKEHDRQVFGQSNSRNPANFASADQKGVDLPVLANTLAKHADATRVPEAEIKRDVSCSNVETILHQLVNKVSRLETILTSFEDRMLKPICSIDARLQLVEEKLEELGKKSFESELLDQTKVPNLGSQGSDTDKTSETDQLDGLNKNTDNPQLASCATTVVPDSASIDKGEDYAVVQPKNKPDDILTKFVEPRNENNSISGEVISAESEISKEEVSHSLGEGSLEENPKRSVSINDALASALTGLLSSTSITDGKFSQALVVRAPDFSDEDDMETEEEPQTDSHPDKSQVAAEELGNTSSASESPTSPRKEPGITLCNEEGSQEMINDVPETLGDTVGGYADGETVVGVSDYGLDGDAVTSSAKADHYSESEKYSYERRNPDSLDHELASSNVTTKESEEEPETGDVLKSVLGFQPNTSSVDFLAPVLDVKFNSERKVSDSMCLFESLFTEGSKTVVVDCDNGGFGDDNLVSVEDGEELKGPPTDTLSSLEMDYYETNEMYLQLNAEISTASLI